Activities carried out
WP 1: Data acquisition
Task 1.1: Collection and conservation of DNA samples
Task 1.2: Sequencing
WP 2: Sequence pre-treatment and database (with Bioinformatics sub-project 4)
WP 3: Comparative population genomics of the domestication process
Task 3.1: Loss and gain of genetic diversity following domestication
Task 3.2: Investigation of demographic scenarios
Task 3.3: Identification of domestication genes
Task 3.4: Investigation of the effect of domestication history and life-history traits on the domestication process
WP4: Life history traits and genome evolution
Task 4.1: Characterization of polymorphism and divergence patterns at the quadruplet scale
Task 4.2: Investigation of the effect of life-history traits and taxonomy: comparison between quadruplets
WP 5: Comparative functional genomics
Task 5.1 Comparative analyses of gene content and organisation of gene families
Task 5.2 Analysis of selective constraints affecting the genes and comparison of molecular function, expression level and family organisation.
Task 5.3: Focus on specific metabolic networks